IMGT® databases, web resources and tools for immunoglobulin and T cell receptor sequence analysis, http://imgt.cines.fr IMGT® databases, web resources and tools for immunoglobulin and T cell receptor sequence analysis, http://imgt.cines.fr

IMGT® databases, web resources and tools for immunoglobulin and T cell receptor sequence analysis, http://imgt.cines.fr


  • Lefranc, M-P & Lefranc, G The Immunoglobulin FactsBook, Academic Press: London (2001).


    Google Scholar
     

  • Lefranc, M-P & Lefranc, G The T Cell Receptor FactsBook, Academic Press: London (2001).


    Google Scholar
     

  • Stoesser, G, Baker, W, Van den Broek, A, Camon, E, Garcia-Pastor, M, Kanz, C, Kulikova, T, Lombard, V, Lopez, R, Parkinson, H, Redaschi, N, Sterk, P, Stoehr, P & Tuli, M-A The EMBL nucleotide sequence database. Nucleic Acids Res, (2001). 29, 17–21.

    Article 
    CAS 

    Google Scholar
     

  • Benson, DA, Karsch-Mizrachi, I, Lipman, D, Ostell, J, Rapp, BA & Wheeler, DL GenBank. Nucleic Acids Res, (2000). 28, 15–18.

    Article 
    CAS 

    Google Scholar
     

  • Tateno, Y, Miyazaki, S, Ota, M, Sugawara, H & Gojobori, T DNA Data Bank of Japan (DDBJ) in collaboration with mass sequencing teams. Nucleic Acids Res, (2000). 28, 24–26.

    Article 
    CAS 

    Google Scholar
     

  • Lefranc, M-P IMGT, the international ImMunoGeneTics database. Nucleic Acids Res, (2001). 29, 207–209.

    Article 
    CAS 

    Google Scholar
     

  • Giudicelli, V, Chaume, D, Bodmer, J, Müller, W, Busin, C, Marsh, S, Bontrop, R, Lemaitre, M, Malik, & Lefranc, M-P IMGT, the international ImMunoGeneTics database. Nucleic Acids Res, (1997). 25, 206–211.

    Article 
    CAS 

    Google Scholar
     

  • Lefranc, M-P, Giudicelli, V, Busin, C, Bodmer, J, Müller, W, Bontrop, R, Lemaitre, M, Malik, A & Chaume, D IMGT, the international ImMunoGeneTics database. Nucleic Acids Res, (1998). 26, 297–303.

    Article 
    CAS 

    Google Scholar
     

  • Lefranc, M-P, Giudicelli, V, Ginestoux, C, Bodmer, J, Müller, W, Bontrop, R, Lemaitre, M, Malik, A, Barbié, V & Chaume, D IMGT, the international ImMunoGeneTics database. Nucleic Acids Res, (1999). 27, 209–212.

    Article 
    CAS 

    Google Scholar
     

  • Ruiz, M, Giudicelli, V, Ginestoux, C, Stoehr, P, Robinson, J, Bodmer, J, Marsh, SG, Bontrop, R, Lemaitre, M, Lefranc, G, Chaume, D & Lefranc, M-P IMGT, the international ImMunoGeneTics database. Nucleic Acids Res, (2000). 28, 219–221.

    Article 
    CAS 

    Google Scholar
     

  • Ruiz, M & Lefranc, M-P IMGT gene identification and Colliers de Perles of human immunoglobulin with known 3D structures. Immunogenetics DOI 10.1007/s00251-001-0408-6. Immunogenetics, (2002). 53, 857–883.

    Article 
    CAS 

    Google Scholar
     

  • Robinson, J, Malik, A, Parham, P, Bodmer, JG & Marsh, SGE IMGT/HLA Database – a sequence database for the human major histocompatibility complex. Tissue Antigens, (2000). 55, 280–287.

    Article 
    CAS 

    Google Scholar
     

  • Giudicelli, V & Lefranc, M-P Ontology for Immunogenetics: IMGT-ONTOLOGY. Bioinformatics, (1999). 12, 1047–1054.

    Article 

    Google Scholar
     

  • Lefranc, M-P Nomenclature of the human immunoglobulin genes. Current Protocols in Immunology, J Wiley and Sons: New York (2000). Suppl. 40, A.1P.1–A.1P.37.


    Google Scholar
     

  • Lefranc, M-P Nomenclature of the human T cell Receptor genes. Current Protocols in Immunology, J Wiley and Sons: New York, USA (2000). Suppl. 40, A.1O.1–A.1O.23.


    Google Scholar
     

  • Lefranc, M-P Locus maps and genomic repertoire of the human Ig genes. Immunologist, (2000). 8, 80–87.

    CAS 

    Google Scholar
     

  • Lefranc, M-P Locus maps and genomic repertoire of the human T-cell receptor genes. Immunologist, (2000). 8, 72–79.

    CAS 

    Google Scholar
     

  • Lefranc, M-P Nomenclature of the human immunoglobulin heavy (IGH) genes. Exp Clin Immunogenet, (2001). 18, 100–116.

    Article 
    CAS 

    Google Scholar
     

  • Lefranc, M-P Nomenclature of the human immunoglobulin kappa (IGK) genes. Exp Clin Immunogenet, (2001). 18, 161–174.

    Article 
    CAS 

    Google Scholar
     

  • Lefranc, M-P Nomenclature of the human immunoglobulin lambda (IGL) genes. Exp Clin Immunogenet, (2001). 18, 242–254.

    Article 
    CAS 

    Google Scholar
     

  • Lefranc, M-P IMGT (ImMunoGeneTics) Locus on Focus. A new section of experimental and clinical immunogenetics. Exp Clin Immunogenet, (1998). 15, 1–7.

    Article 
    CAS 

    Google Scholar
     

  • Pallarès, N, Frippiat, JP, Giudicelli, V & Lefranc, M-P The human immunoglobulin lambda variable (IGLV) genes and joining (IGLJ) segments. Exp Clin Immunogenet, (1998). 15, 8–18.

    Article 

    Google Scholar
     

  • Barbié, V & Lefranc, M-P The human immunoglobulin kappa variable (IGKV) genes and joining (IGKJ) segments. Exp Clin Immunogenet, (1998). 15, 171–183.

    Article 

    Google Scholar
     

  • Pallarès, N, Lefebvre, S, Contet, V, Matsuda, F & Lefranc, M-P The human immunoglobulin heavy variable (IGHV) genes. Exp Clin Immunogenet, (1999). 16, 36–60.

    Article 

    Google Scholar
     

  • Ruiz, M, Pallarès, N, Contet, V, Barbié, V & Lefranc, M-P The human immunoglobulin heavy diversity (IGHD) and joining (IGHJ) segments. Exp Clin Immunogenet, (1999). 16, 173–184.

    Article 
    CAS 

    Google Scholar
     

  • Folch, G & Lefranc, M-P The human T cell receptor beta variable (TRBV) genes. Exp Clin Immunogenet, (2000). 17, 42–54.

    Article 
    CAS 

    Google Scholar
     

  • Scaviner, D & Lefranc, M-P The human T cell receptor alpha variable (TRAV) genes. Exp Clin Immunogenet, (2000). 17, 83–96.

    Article 
    CAS 

    Google Scholar
     

  • Scaviner, D & Lefranc, M-P The human T cell receptor alpha joining (TRAJ) genes. Exp Clin Immunogenet, (2000). 17, 97–106.

    Article 
    CAS 

    Google Scholar
     

  • Folch, G & Lefranc, M-P The human T cell receptor beta diversity (TRBD) and beta joining (TRBJ) genes. Exp Clin Immunogenet, (2000). 17, 107–114.

    Article 
    CAS 

    Google Scholar
     

  • Scaviner, D, Barbié, V, Ruiz, M & Lefranc, M-P Protein displays of the human immunoglobulin heavy, kappa and lambda variable and joining regions. Exp Clin Immunogenet, (1999). 16, 234–240.

    Article 
    CAS 

    Google Scholar
     

  • Folch, G, Scaviner, D, Contet, V & Lefranc, M-P Protein displays of the human T cell receptor alpha, beta, gamma and delta variable and joining regions. Exp Clin Immunogenet, (2000). 17, 205–215.

    Article 
    CAS 

    Google Scholar
     

  • Lefranc, M-P Unique database numbering system for immunogenetic analysis. Immunol Today, (1997). 18, 509

    Article 
    CAS 

    Google Scholar
     

  • Lefranc, M-P The IMGT unique numbering for Immunoglobulins, T cell receptors and Ig-like domains. Immunologist, (1999). 7, 132–136.

    CAS 

    Google Scholar
     

  • Kabat, EA, Wu, TT, Perry, HM, Gottesman, KS & Foeller, C Sequences of Proteins of Immunological Interest, National Institute of Health Publications: Washington DC (1991). 91–3242.


    Google Scholar
     

  • Satow, Y, Cohen, GH, Padlan, EA & Davies, DR Phosphocholine binding immunoglobulin Fab McPC603. J Mol Biol, (1986). 190, 593–604.

    Article 
    CAS 

    Google Scholar
     

  • Chothia, C & Lesk, AM Canonical structures for the hypervariable regions of immunoglobulins. J Mol Biol, (1987). 196, 901–917.

    Article 
    CAS 

    Google Scholar
     

  • Lefranc, M-P Web sites of Interest to immunologists. Current Protocols in Immunology, J Wiley and Sons: New York (2000). A.1J.1–A.1J.33.


    Google Scholar
     

  • Giudicelli, V, Chaume, D & Lefranc, M-P IMGT/LIGM-DB: A systematized approach for ImMunoGeneTics database coherence and data distribution improvement. Proceedings of the Sixth International Conference on Intelligent Systems for Molecular Biology, ISBM-98. (1998). 59–68.

  • Giudicelli, V, Chaume, D, Mennessier, G, Althaus, HH, Mller, W, Bodmer, J, Malik, A & Lefranc, M-P IMGT, the international ImMunoGeneTics database: a new Design for Immunogenetics Data Access. In: Cesnik B et al (eds). Proceedings of the Ninth World Congress on Medical Informatics, MEDINFO’ 98, IOS Press: Amsterdam (1998). 351–355.


    Google Scholar
     

  • Lefranc, M-P IMGT, the international ImMunoGeneTics database: a high-quality information system for comparative immmunogenetics and immunology. Dev Comp Immunol, (in press)

  • Eckert, C, Landt, O, Taube, T, Seeger, K, Beyermann, B, Proba, J & Henze, G Potential of LightCycler technology for quantification of minimal residual disease in childhood acute lymphoblastic leukemia. Leukemia, (2000). 14, 316–323.

    Article 
    CAS 

    Google Scholar
     

  • Delabesse, E, Burtin, ML, Millien, C, Madonik, A, Arnulf, B, Beldjord, K, Valensi, F & Macintyre, EA Rapid, multifluorescent TCRG Vgamma and Jgamma typing: application to T cell acute lymphoblastic leukemia and to the detection of minor clonal populations. Leukemia, (2000). 14, 1143–1152.

    Article 
    CAS 

    Google Scholar
     

  • Szczepanski, T, Langerak, AW, Willemse, MJ, Wolvers-Tettero, ILM, van Wering, ER & van Dongen, JJM T cell receptor gamma (TCRG) gene rearrangements in T cell acute lymphoblastic leukemia reflect ‘end-stage’ recombinations: implications for minimal residual disease monitoring. Leukemia, (2000). 14, 1208–1214.

    Article 
    CAS 

    Google Scholar
     

  • Bruggemann, M, Droese, J, Bolz, I, Luth, P, Pott, C, von Neuhoff, N, Scheuering, U & Kneba, M Improved assessment of minimal residual disease in B cell malignancies using fluorogenic consensus probes for real-time quantitative PCR. Leukemia, (2000). 14, 1419–1425.

    Article 
    CAS 

    Google Scholar
     

  • Verhagen, OJHM, Willemse, MJ, Breunis, WB, Wijkhuijs, AJM, Jacobs, DCH, Joosten, SA, van Wering, ER, van Dongen, JJM & van der Schoot, CE Application of germline IGH probes in real-time quantitative PCR for the detection of minimal residual disease in acute lymphoblastic leukemia. Leukemia, (2000). 14, 1426–1435.

    Article 
    CAS 

    Google Scholar
     

  • De Haas, V, Verhagen, OJ, von dem Borne, AE, Kroes, W, van den Berg, H & van der Schoot, CE Quantification of minimal residual disease in children with oligoclonal B-precursor acute lymphoblastic leukemia indicates that the clones that grow out during relapse already have the slowest rate of reduction during induction therapy. Leukemia, (2001). 15, 134–140.

    Article 
    CAS 

    Google Scholar
     

  • Szczepanski, T, Willemse, MJ, van Wering, ER, Weerden, JF, Kamps, WA & van Dongen, JJM Precursor-B-ALL with DH-JH gene rearrangements have an immature immunogenotype with a high frequency of oligoclonality and hyperdiploidy of chromosome 14. Leukemia, (2001). 15, 1415–1423.

    Article 
    CAS 

    Google Scholar
     

  • Moreira, I, Papaioannou, M, Mortuza, FY, Gameiro, P, Palmisano, GL, Harrison, CJ, Prentice, HG, Mehta, AB, Hoffbrand, AV & Foroni, L Heterogeneity of VH-JH gene rearrangement patterns: an insight into the biology of B cell precursor ALL. Leukemia, (2001). 15, 1527–1536.

    Article 
    CAS 

    Google Scholar
     

  • Boeckx, N, Willemse, MJ, Szczepanski, T, van Der Velden, VHJ, Langerak, AW, Vandekerckhove, P & van Dongen, JJM Fusion gene transcripts and Ig/TCR gene rearrangements are complementary but infrequent targets for PCR-based detection of minimal residual disease in acute myeloid leukemia. Leukemia, (2002). 16, 368–375.

    Article 
    CAS 

    Google Scholar
     

  • Van der Velden, VHJ, Wijkhuijs, JM, Jacobs, DCH, van Wering, ER & van Dongen, JJM T cell receptor gamma gene rearrangements as targets for detection of minimal residual disease in acute lymphoblastic leukemia by real-time quantitative PCR analysis. Leukemia, (2002). 16, (in press)

  • Van der Velden, VHJ, Willemse, MJ, van der Schoot, CE, van Wering, ER & van Dongen, JJM Immunoglobulin kappa deleting element rearrangements in precursor–B acute lymphoblastic leukemia are stable targets for detection of minimal residual disease by real-time quantitative PCR. Leukemia, (2002). 16, (in press)